miRBase entry: ame-mir-6012

Stem-loop ame-mir-6012


Accession
MI0020317
Description
Apis mellifera ame-mir-6012 precursor miRNA
Gene family
MIPF0001496; mir-6012

Literature search
1 open access papers mention ame-mir-6012
(1 sentences)

Sequence

ggcaggguuagcaggcugauauugucgggcgggguguggaacaaguaagucauUUCGGCGAUGAGAUCAGCCUGUcgaacccugc
.((((((((.((((((((((.((((((..(((((((..............))))))).)))))).))))))))))..))))))))

Structure
g        -a          a      gg       uggaac 
 gcaggguu  gcaggcugau uugucg  cggggug      a
 ||||||||  |||||||||| ||||||  |||||||       
 cgucccaa  UGUCCGACUA AGUAGC  GCUUuac      a
-        gc          G      -G       ugaaug 


Annotation confidence Not enough data
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Genome context
CM000060.5: 1733943-1734027 [+]

Database links

Mature ame-miR-6012-3p

Accession MIMAT0023670
Description Apis mellifera ame-miR-6012-3p mature miRNA
Sequence 54 - UUCGGCGAUGAGAUCAGCCUGU - 75
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 22458842
    Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
    "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
    "Insect Mol Biol (2012) 21:297-303

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670