miRBase entry: ame-mir-6052

Stem-loop ame-mir-6052


Accession
MI0020323
Description
Apis mellifera ame-mir-6052 precursor miRNA


Sequence

aaaauaaauuAUGCAAAAGCUAGAACUCAUAGAauauaauuucuuauacaucuaugagcguagauauuuugcuauaauaauauug
.......(((((((((((.(((...((((((((.(((((....)))))..))))))))..)))...)))))).))))).......

Structure
aaaauaa     -      --G   GAA        -a     u 
       auuAU GCAAAA   CUA   CUCAUAGA  uauaa u
       ||||| ||||||   |||   ||||||||  |||||  
       uaaua cguuuu   gau   gaguaucu  auauu u
guuauaa     u      aua   -gc        ac     c 


Annotation confidence Not enough data
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Genome context
CM000056.5: 6138324-6138408 [+]

Database links

Mature ame-miR-6052-5p

Accession MIMAT0023676
Description Apis mellifera ame-miR-6052-5p mature miRNA
Sequence 11 - AUGCAAAAGCUAGAACUCAUAGA - 33
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 22458842
    Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
    "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
    "Insect Mol Biol (2012) 21:297-303

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226