miRBase entry: hsa-mir-6082

Stem-loop hsa-mir-6082


Accession
MI0020359
Symbol
HGNC: MIR6082
Description
Homo sapiens hsa-mir-6082 precursor miRNA


Sequence

uugaaGAAUACGUCUGGUUGAUCCaguccacuuaauucugagaaaguccacagacuggaucgggucuuggauuuuagcuggauucauugacugggcuauauuugucaua
.(((.(((((.((((((((((((((((...((((....))))((((((((.(((((......))))))))))))).))))))))....))))))))..))))).)))..

Structure
-u   a     -C        ----        ccacuuaauucugag        c     gg 
  uga GAAUA  GUCUGGUU    GAUCCagu               aaagucca agacu  a
  ||| |||||  ||||||||    ||||||||               |||||||| |||||   
  acu uuuau  cgggucag    uuaggucg               uuuuaggu ucugg  u
au   g     au        uuac        --------------a        -     gc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr4: 171186184-171186292 [+]

Database links

Mature hsa-miR-6082

Accession MIMAT0023707
Description Homo sapiens hsa-miR-6082 mature miRNA
Sequence 6 - GAAUACGUCUGGUUGAUCC - 24
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22282338
    Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs
    "Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F"
    "RNA (2012) 18:472-484