miRBase entry: cgr-mir-132

Stem-loop cgr-mir-132


Accession
MI0020396
Description
Cricetulus griseus cgr-mir-132 precursor miRNA
Gene family
MIPF0000065; mir-132


Sequence

8243 reads, 117 reads per million, 6 experiments
uccagggcaACCGUGGCUUUCGAUUGUUACUgugggaaccggaggUAACAGUCUACAGCCAUGGUCGccccgcagca
....((((.(((((((((...((((((((((.(((...)))..))))))))))...))))))))).)))).......

Structure
---ucca    a         UUC          -g   g 
       gggc ACCGUGGCU   GAUUGUUACU  ugg  
       |||| |||||||||   ||||||||||  ||| a
       cccG UGGUACCGA   CUGACAAUgg  gcc  
acgacgc    C         CAU          ag   a 


Annotation confidence Not enough data
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Genome context
JH000768.1: 800228-800304 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cgr-mir-132
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-132-5p

Accession MIMAT0023758
Description Cricetulus griseus cgr-miR-132-5p mature miRNA
Sequence 10 - ACCGUGGCUUUCGAUUGUUACU - 31
Evidence experimental
Illumina [1]

Mature cgr-miR-132-3p

Accession MIMAT0023759
Description Cricetulus griseus cgr-miR-132-3p mature miRNA
Sequence 46 - UAACAGUCUACAGCCAUGGUCG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75