Stem-loop cgr-mir-151

Accession

MI0020412

Description

Cricetulus griseus cgr-mir-151 precursor miRNA

Gene family

MIPF0000057; mir-28

Sequence

293053 reads, 4048 reads per million, 6 experiments

uuccugcccUCGAGGAGCUCACAGUCUAGUaugucuccuuccuaCUAGACUGAGGCUCCUUGAGGacagggaucg
((((((.((((((((((((..((((((((((.(.......).)))))))))).)))))))))))).))))))...

Structure

---      c            CA          u uc 
   uuccug ccUCGAGGAGCU  CAGUCUAGUa g  u
   |||||| ||||||||||||  |||||||||| |  c
   agggac GGAGUUCCUCGG  GUCAGAUCau c  c
gcu      a            -A          c uu 

Annotation confidence High

Genome context

JH001423.1: 191400-191474 [+]

Mature cgr-miR-151-5p

• Accession: MIMAT0023782
• Description: Cricetulus griseus cgr-miR-151-5p mature miRNA
• Sequence: 10 - UCGAGGAGCUCACAGUCUAGU - 30
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-151-3p

• Accession: MIMAT0023783
• Description: Cricetulus griseus cgr-miR-151-3p mature miRNA
• Sequence: 45 - CUAGACUGAGGCUCCUUGAGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75