Stem-loop cgr-mir-184

Accession

MI0020427

Description

Cricetulus griseus cgr-mir-184 precursor miRNA

Gene family

MIPF0000059; mir-184

Sequence

8203 reads, 86 reads per million, 6 experiments

ucgccuggcaaucacguuuccuuaucacuuuuccagccagcuuugugacucuaaguguUGGACGGAGAACUGAUAAGGGUaggugauugg
........(((((((.(.(((((((((.((((((..(((((((((......)))).)))))..)))))).))))))))).).))))))).

Structure

ucgccugg       g u         c      ag     -    ug 
        caaucac u uccuuauca uuuucc  ccagc uuug  a
        ||||||| | ||||||||| ||||||  ||||| ||||   
        guuagug a GGGAAUAGU AAGAGG  GGUug gaau  c
-------g       g U         C      CA     u    cu 

Annotation confidence Not enough data

Genome context

JH000018.1: 1675074-1675163 [+]

Mature cgr-miR-184

• Accession: MIMAT0023809
• Description: Cricetulus griseus cgr-miR-184 mature miRNA
• Sequence: 59 - UGGACGGAGAACUGAUAAGGGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75