miRBase entry: cgr-mir-1903

Stem-loop cgr-mir-1903


Accession
MI0020435
Description
Cricetulus griseus cgr-mir-1903 precursor miRNA


Sequence

5642 reads, 52 reads per million, 6 experiments
ugugagccacuauguuggugcuaggaauugaacucagguccuCUGGAAGAGGAACAAGUGcucucaccug
.(((((.((((.((((..(.(.((((.(((....))).))))..).).....))))))))..)))))...

Structure
--u     -c    a    ---gg g -u    a   a 
   gugag  cacu uguu     u c  agga uug a
   |||||  |||| ||||     | |  |||| |||  
   cacuc  GUGA ACAA     A G  uccu gac c
guc     uc    -    GGAGA G UC    g   u 


Annotation confidence Low
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Genome context
JH000062.1: 1861154-1861223 [+]

Database links

Mature cgr-miR-1903

Accession MIMAT0023820
Description Cricetulus griseus cgr-miR-1903 mature miRNA
Sequence 43 - CUGGAAGAGGAACAAGUG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75