miRBase entry: cgr-mir-190b

Stem-loop cgr-mir-190b


Accession
MI0020436
Description
Cricetulus griseus cgr-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190


Sequence

4335 reads, 53 reads per million, 6 experiments
gcuucugugUGAUAUGUUUGAUAUUGGGUUGuuaaauuaggaaccaacuaaaugucaaacauauucucauagcagugagg
(((.(((((.(((((((((((((((.(((((((........)).))))).)))))))))))))))..))))).)))....

Structure
----   u     -U               G     -  aaa 
    gcu cugug  GAUAUGUUUGAUAUU GGUUG uu   u
    ||| |||||  ||||||||||||||| ||||| ||    
    uga gauac  uuauacaaacuguaa ucaac aa   u
ggag   c     uc               a     c  gga 


Annotation confidence Not enough data
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Genome context
JH000275.1: 1258190-1258269 [+]

Database links

Mature cgr-miR-190b

Accession MIMAT0023821
Description Cricetulus griseus cgr-miR-190b mature miRNA
Sequence 10 - UGAUAUGUUUGAUAUUGGGUUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75