miRBase entry: cgr-mir-218a

Stem-loop cgr-mir-218a


Accession
MI0020462
Description
Cricetulus griseus cgr-mir-218a precursor miRNA
Gene family
MIPF0000026; mir-218


Sequence

8977 reads, 115 reads per million, 6 experiments
ggcuuuccuUUGUGCUUGAUCUAACCAUGUGguggaacgauggaaacggaacaugguucugucaagcaccgcggaaagua
.(((((((...(((((((((..((((((((..((............))..))))))))..)))))))))...))))))).

Structure
g       uUU         CU        Gg  gaacg 
 gcuuucc   GUGCUUGAU  AACCAUGU  ug     a
 |||||||   |||||||||  ||||||||  ||      
 ugaaagg   cacgaacug  uugguaca  gc     u
a       cgc         uc        ag  aaagg 


Annotation confidence Low
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Genome context
JH000047.1: 925537-925616 [+]

Database links

Mature cgr-miR-218a

Accession MIMAT0023855
Description Cricetulus griseus cgr-miR-218a mature miRNA
Sequence 10 - UUGUGCUUGAUCUAACCAUGUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75