Stem-loop cgr-mir-325

Accession

MI0020494

Description

Cricetulus griseus cgr-mir-325 precursor miRNA

Gene family

MIPF0000147; mir-325

Sequence

3073 reads, 31 reads per million, 6 experiments

gugcuugguuCCUAGUAGGUGCUCAGUAAGUguuugugacauaauucgUUUAUUGAGCACCUCCUAUCAaucaagcac
((((((((((..(((.((((((((((((((((..(........)..)))))))))))))))).)))..))))))))))

Structure

          CC   U                uu gug 
gugcuugguu  UAG AGGUGCUCAGUAAGUg  u   a
||||||||||  ||| ||||||||||||||||  |    
cacgaacuaA  AUC UCCACGAGUUAUUUgc  a   c
          CU   C                uu aua 

Annotation confidence Low

Genome context

JH000560.1: 45184-45261 [-]

Mature cgr-miR-325-5p

• Accession: MIMAT0023911
• Description: Cricetulus griseus cgr-miR-325-5p mature miRNA
• Sequence: 11 - CCUAGUAGGUGCUCAGUAAGU - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-325-3p

• Accession: MIMAT0023912
• Description: Cricetulus griseus cgr-miR-325-3p mature miRNA
• Sequence: 49 - UUUAUUGAGCACCUCCUAUCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75