Stem-loop cgr-mir-369

Accession

MI0020512

Description

Cricetulus griseus cgr-mir-369 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

5304 reads, 76 reads per million, 6 experiments

cuugaagggAGAUCGACCGUGUUAUAUUCGCuuggcugacuucgAAUAAUACAUGGUUGAUCUUUucucgguauc
.((((.((((((((((((((((..((((((...((....)).))))))..)))))))))))))))).))))....

Structure

---c    a                UA      Cuu  c 
    uuga gggAGAUCGACCGUGU  UAUUCG   gg u
    |||| ||||||||||||||||  ||||||   ||  
    ggcu uUUUCUAGUUGGUACA  AUAAgc   uc g
cuau    c                UA      --u  a 

Annotation confidence Low

Genome context

JH000884.1: 73327-73401 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cgr-mir-369

Mature cgr-miR-369-5p

• Accession: MIMAT0023937
• Description: Cricetulus griseus cgr-miR-369-5p mature miRNA
• Sequence: 10 - AGAUCGACCGUGUUAUAUUCGC - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-369-3p

• Accession: MIMAT0023938
• Description: Cricetulus griseus cgr-miR-369-3p mature miRNA
• Sequence: 45 - AAUAAUACAUGGUUGAUCUUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75