miRBase entry: cgr-mir-582

Stem-loop cgr-mir-582


Accession
MI0020541
Description
Cricetulus griseus cgr-mir-582 precursor miRNA
Gene family
MIPF0000417; mir-582


Sequence

5049 reads, 58 reads per million, 6 experiments
guacucuuugguuacaguuguucaaccaguuacuaaucuaacuaauugUAACCUGUUGAACAACUGAACCCaaagggugc
(((((((((((...((((((((((((..(((((..............)))))..))))))))))))...)))))))))))

Structure
           uua            ca     uaaucu 
guacucuuugg   caguuguucaac  guuac      a
|||||||||||   ||||||||||||  |||||       
cgugggaaaCC   GUCAACAAGUUG  CAAUg      a
           CAA            UC     uuaauc 


Annotation confidence Not enough data
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Genome context
JH000035.1: 1797957-1798036 [-]

Database links

Mature cgr-miR-582

Accession MIMAT0023985
Description Cricetulus griseus cgr-miR-582 mature miRNA
Sequence 49 - UAACCUGUUGAACAACUGAACCC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75