miRBase entry: cgr-mir-632

Stem-loop cgr-mir-632


Accession
MI0020545
Description
Cricetulus griseus cgr-mir-632 precursor miRNA
Gene family
MIPF0000527; mir-632


Sequence

9797 reads, 216 reads per million, 6 experiments
cucucgccgcgguggccgacgggagguggaaagagaacgagggugucggccauuuugugucuGUUUCCUGUGGGACGCGGcgguggcggu
((.(((((((.(((.((.((((((((((((.(.((((....(((....))).)))).).)))))))))))).)).))).))))))).)).

Structure
-  c       g   g  g            a g    cgag   g 
 cu ucgccgc gug cc acgggaggugga a agaa    ggu u
 || ||||||| ||| || |||||||||||| | ||||    |||  
 gg gguggcG CGC GG UGUCCUUUGucu u uuuu    ccg c
u  c       G   A  G            g g    ---a   g 


Annotation confidence Not enough data
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Genome context
JH000022.1: 2064613-2064702 [+]

Database links

Mature cgr-miR-632

Accession MIMAT0023990
Description Cricetulus griseus cgr-miR-632 mature miRNA
Sequence 63 - GUUUCCUGUGGGACGCGG - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75