miRBase entry: cgr-mir-672

Stem-loop cgr-mir-672


Accession
MI0020550
Description
Cricetulus griseus cgr-mir-672 precursor miRNA
Gene family
MIPF0000391; mir-672


Sequence

5347 reads, 78 reads per million, 6 experiments
cuuuaguuuUGAGGUUGGUGUACUGUGUGUGAguauacauauuuaucacacacagucaccaucuucgaaagugagggugc
(((((.((((((((.(((((.(((((((((((..(.......)..)))))))))))))))).)))))))).)))))....

Structure
----     g        U     U           gu ua 
    cuuua uuuUGAGG UGGUG ACUGUGUGUGA  a  c
    ||||| |||||||| ||||| |||||||||||  |  a
    ggagu aaagcuuc accac ugacacacacu  u  u
cgug     g        u     -           au ua 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cgr-miR-672

Accession MIMAT0023998
Description Cricetulus griseus cgr-miR-672 mature miRNA
Sequence 10 - UGAGGUUGGUGUACUGUGUGUGA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75