miRBase entry: cgr-mir-744

Stem-loop cgr-mir-744


Accession
MI0020555
Description
Cricetulus griseus cgr-mir-744 precursor miRNA
Gene family
MIPF0000431; mir-744


Sequence

50996 reads, 684 reads per million, 6 experiments
ugggcaaggUGCGGGGCUAGGGCUAACAGCagucuuacugaagguuuccuggaaaccacacacaugCUGUUGCCACUAACCUCAACCuuacucgguc
((((.(((((..((((.((((((.(((((((.......((..((((((...)))))).))....)))))))))).))).)))).))))).))))...

Structure
---    c     GC    C   -   U       gucuuac  aa      c 
   uggg aaggU  GGGG UAG GGC AACAGCa       ug  gguuuc  
   |||| |||||  |||| ||| ||| |||||||       ||  |||||| u
   gcuc uuCCA  CUCC AUC CCG UUGUCgu       ac  ccaaag  
cug    a     -A    A   A   -       ---acac  -a      g 


Annotation confidence High
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Genome context
JH000072.1: 2126137-2126233 [+]

Database links

Mature cgr-miR-744-5p

Accession MIMAT0024002
Description Cricetulus griseus cgr-miR-744-5p mature miRNA
Sequence 10 - UGCGGGGCUAGGGCUAACAGC - 30
Evidence experimental
Illumina [1]

Mature cgr-miR-744-3p

Accession MIMAT0024003
Description Cricetulus griseus cgr-miR-744-3p mature miRNA
Sequence 67 - CUGUUGCCACUAACCUCAACC - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75