miRBase entry: cgr-mir-6092

Stem-loop cgr-mir-6092


Accession
MI0020566
Description
Cricetulus griseus cgr-mir-6092 precursor miRNA


Sequence

9446 reads, 125 reads per million, 6 experiments
ggucccugcuucagagcagggucaugucuuuguucuagcagguuguaccaUGGACAAGGCUGUGCUCUGAGugcugaggc
.(((.(.(((((((((((.((((.(((((.((.....(((...)))..)).))))).)))).))))))))).)).).)))

Structure
g   c u  -         g    a     u  uucua   g 
 guc c gc uucagagca gguc ugucu ug     gca  
 ||| | || ||||||||| |||| ||||| ||     ||| g
 cgg g cg GAGUCUCGU UCGG ACAGG ac     ugu  
-   a u  u         G    A     U  ---ca   u 


Annotation confidence Not enough data
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Genome context
JH000058.1: 3412039-3412118 [-]

Database links

Mature cgr-miR-6092

Accession MIMAT0024019
Description Cricetulus griseus cgr-miR-6092 mature miRNA
Sequence 51 - UGGACAAGGCUGUGCUCUGAG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75