miRBase entry: ptr-mir-4510

Stem-loop ptr-mir-4510


Accession
MI0020574
Description
Pan troglodytes ptr-mir-4510 precursor miRNA
Gene family
MIPF0001467; mir-4510


Sequence

ucuguggaauaguguguaugUGAGGGAGUAGGAUGUAUGGUuguuagauagacaacuacaaucuuuucucacaacagacagagccugucauugaguaggcacucaaaaau
.....((....((.(((.(((((((((...((((...((((((((.....))))))))..)))))))))))))))).))....)).....((((((....))))))....

Structure
--------------------ucugu  aaua  g   a         GUA    GUA        a 
                         gg    gu ugu ugUGAGGGA   GGAU   UGGUuguu g
                         ||    || ||| |||||||||   ||||   |||||||| a
                         cc    ca aca acacucuuu   ucua   aucaacag u
uaaaaacucacggaugaguuacugu  gaga  g   -         ---    -ac        a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr15: 16271036-16271145 [+]

Database links

Mature ptr-miR-4510

Accession MIMAT0024027
Description Pan troglodytes ptr-miR-4510 mature miRNA
Sequence 21 - UGAGGGAGUAGGAUGUAUGGU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116