miRBase entry: ptr-mir-4446

Stem-loop ptr-mir-4446


Accession
MI0020576
Description
Pan troglodytes ptr-mir-4446 precursor miRNA
Gene family
MIPF0001385; mir-4446


Sequence

uacuucaggauugaugaguccaguggcucugguccauuucccugccauucccuuggcuucaauuuacuccCAGGGCUGGCAGUGAGAUGGGucaaggcucacaccuucac
.......(((((....))))).((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).))).)))........

Structure
uacuucaggauugaugagucca   -   c           c      uuc      cuuca 
                      gug gcu ugguccauuuc cugcca   ccuugg     a
                      ||| ||| ||||||||||| ||||||   ||||||     u
                      cac cgg acuGGGUAGAG GACGGU   GGGACc     u
--------------cacuucca   u   a           U      --C      cucau 


Annotation confidence Not enough data
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Genome context
chr3: 116715991-116716100 [+]

Database links

Mature ptr-miR-4446

Accession MIMAT0024029
Description Pan troglodytes ptr-miR-4446 mature miRNA
Sequence 71 - CAGGGCUGGCAGUGAGAUGGG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116