Stem-loop ptr-mir-320e

Accession

MI0020577

Description

Pan troglodytes ptr-mir-320e precursor miRNA

Gene family

MIPF0000163; mir-320

Sequence

ucaaaaaaaugaaaagaaaagaaaauaccuccauggggccuucucuucccaguucuuccuggagucggggAAAAGCUGGGUUGAGAAGGUGAaaagaaaaaacaaaccuuga
...........................(((....)))((((((((..(((((((.(((((.(...).))))).)))))))..))))))))......................

Structure

ucaaaaaaaugaaaagaaaagaaaauaccuccauggg        uu       c     g a 
                                     gccuucuc  cccaguu uuccu g  
                                     ||||||||  ||||||| ||||| | g
                                     UGGAAGAG  GGGUCGA AAggg c  
---------------aguuccaaacaaaaaagaaaAG        UU       A     g u 

Annotation confidence Not enough data

Genome context

chr19: 48828922-48829033 [-]

Mature ptr-miR-320e

• Accession: MIMAT0024030
• Description: Pan troglodytes ptr-miR-320e mature miRNA
• Sequence: 71 - AAAAGCUGGGUUGAGAAGGUGA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116