miRBase entry: ptr-mir-767

Stem-loop ptr-mir-767


Accession
MI0020579
Description
Pan troglodytes ptr-mir-767 precursor miRNA
Gene family
MIPF0000552; mir-767


Sequence

auauuguagguuuuugcucaUGCACCAUGGUUGUCUGAGCAugcagcaugcuugucugcucauaccccaugguuucugagcaggaaccuucauugucuacugcuuuacagg
(((.((.(((((((((((((...(((((((..((.((((((.((((.....)))).)))))).)).)))))))...))))))))))))).)).)))...(((.....))).

Structure
---------------   u  u             UGC       UU  C      u    c 
               aua ug agguuuuugcuca   ACCAUGG  GU UGAGCA gcag a
               ||| || |||||||||||||   |||||||  || |||||| |||| u
               ugu ac uccaaggacgagu   ugguacc  ca acucgu uguu g
ggacauuucgucauc   u  u             cuu       -c  u      c    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 152096905-152097015 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ptr-mir-767
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ptr-miR-767

Accession MIMAT0024032
Description Pan troglodytes ptr-miR-767 mature miRNA
Sequence 21 - UGCACCAUGGUUGUCUGAGCA - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116