miRBase entry: ptr-mir-2392

Stem-loop ptr-mir-2392


Accession
MI0020584
Description
Pan troglodytes ptr-mir-2392 precursor miRNA
Gene family
MIPF0001614; mir-2392


Sequence

acauuuugauauggucccucccaauccagccauuccuuggaccagguggcucccgagccaccccaggcugUAGGAUGGGGGUGAGAGGUGcuagauagucacaaaacuga
......((((.((((.((((.((.(((..((((.((((((.((.(((((((....)))))))...))))).)))))))))))).)))).))))....)))).........

Structure
---acauuu    ---a    c    c  a   ag    u   -   a  --a       c 
         ugau    uggu ccuc ca ucc  ccau ccu ugg cc   gguggcu c
         ||||    |||| |||| || |||  |||| ||| ||| ||   |||||||  
         acug    aucG GGAG GU GGG  GGUA GGA guc gg   ccaccga c
agucaaaac    auag    U    A  -   --    -   U   -  acc       g 


Annotation confidence Not enough data
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Genome context
chr14: 86058810-86058919 [+]

Database links

Mature ptr-miR-2392

Accession MIMAT0024037
Description Pan troglodytes ptr-miR-2392 mature miRNA
Sequence 71 - UAGGAUGGGGGUGAGAGGUG - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116