miRBase entry: ptr-mir-3129

Stem-loop ptr-mir-3129


Accession
MI0020588
Description
Pan troglodytes ptr-mir-3129 precursor miRNA
Gene family
MIPF0001458; mir-3129


Sequence

aaaaaaaaaguuguacuuggGCAGUAGUGUAGAGAUUGGUuugccuguuaaugaauucaaacuaaucucuacacugcugcccaagaacauccuauauucaacuucuuuau
........((.(((.((((((((((((((((((((((((((((..(........)..)))))))))))))))))))))))))))).)))..)).................

Structure
---------aaaaaaaa  -u   a                            cc guu 
                 ag  ugu cuuggGCAGUAGUGUAGAGAUUGGUuug  u   a
                 ||  ||| ||||||||||||||||||||||||||||  |    
                 uc  aca gaacccgucgucacaucucuaaucaaac  a   a
uauuucuucaacuuaua  cu   a                            uu agu 


Annotation confidence Not enough data
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Genome context
chr2B: 79672084-79672193 [-]

Database links

Mature ptr-miR-3129

Accession MIMAT0024041
Description Pan troglodytes ptr-miR-3129 mature miRNA
Sequence 21 - GCAGUAGUGUAGAGAUUGGU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116