miRBase entry: ptr-mir-3192

Stem-loop ptr-mir-3192


Accession
MI0020589
Description
Pan troglodytes ptr-mir-3192 precursor miRNA
Gene family
MIPF0001597; mir-3192


Sequence

ggaaagacagaggaagggauUCUGGGAGGUUGUAGCAGUGGAaaaaguucuuuucuuccucugaucgcccucucagcucuuuccuucugacugaaaaucaucuucagcaccu
.......(((((((((((...((((((((.((...(((.((((.(((....))).)))).)))..)).)))))))).))))))).)))).(((((.......))))).....

Structure
----------------ggaaaga    -       auU        U  UAG   U    a   u 
                       caga ggaaggg   CUGGGAGG UG   CAG GGAa aag u
                       |||| |||||||   |||||||| ||   ||| |||| |||  
                       gucu ccuuucu   gacucucc gc   guc ccuu uuu c
uccacgacuucuacuaaaaguca    u       --c        c  -ua   u    c   u 


Annotation confidence Not enough data
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Genome context
chr20: 18446570-18446681 [+]

Database links

Mature ptr-miR-3192

Accession MIMAT0024042
Description Pan troglodytes ptr-miR-3192 mature miRNA
Sequence 21 - UCUGGGAGGUUGUAGCAGUGGA - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116