miRBase entry: ptr-mir-4743

Stem-loop ptr-mir-4743


Accession
MI0020592
Description
Pan troglodytes ptr-mir-4743 precursor miRNA
Gene family
MIPF0001384; mir-4743


Sequence

gacugucccuccucuccugcUGGCCGGAUGGGACAGGAGGCAugaaugagccaucuuuccaaugccuuucugucuuuucugguccagguguggcaaagggaagcuggaagau
.....(((((((.(.((((..(((((((.(((((((((((((((((.((....)).)))..))))).))))))))).))))))))))).).))...)))))...........

Structure
------gacug     ---  u u    cU       U         -     --   u  g 
           ucccu   cc c ccug  GGCCGGA GGGACAGGA GGCAu  gaa ga c
           |||||   || | ||||  ||||||| ||||||||| |||||  ||| ||  
           aggga   gg g ggac  cuggucu uucugucuu ccgua  cuu cu c
uagaaggucga     aac  u u    --       u         u     ac   u  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr18: 45907379-45907490 [+]

Database links

Mature ptr-miR-4743

Accession MIMAT0024045
Description Pan troglodytes ptr-miR-4743 mature miRNA
Sequence 21 - UGGCCGGAUGGGACAGGAGGCA - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116