miRBase entry: ptr-mir-676

Stem-loop ptr-mir-676


Accession
MI0020596
Description
Pan troglodytes ptr-mir-676 precursor miRNA
Gene family
MIPF0000471; mir-676


Sequence

agacuucauaucagauucucaccugaacgcaugacucuucaaccucaggacuugcagaauuaauggaaugCUGUCCUAAGGUUGUUGAGUugugcauuucugggcauuuc
............((((.((((...(((.(((((((((..((((((.(((((..(((............))).))))).))))))..))))))))).))).)))).)))).

Structure
agacuucauauc    u    ccu   c         uu      c     uu   gaauu 
            agau cuca   gaa gcaugacuc  caaccu aggac  gca     a
            |||| ||||   ||| |||||||||  |||||| |||||  |||      
            uuua gggu   uuu cguguUGAG  GUUGGA UCCUG  Cgu     a
-----------c    c    --c   a         UU      A     -U   aaggu 


Annotation confidence Not enough data
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Genome context
chrX: 69386477-69386586 [+]

Database links

Mature ptr-miR-676

Accession MIMAT0024049
Description Pan troglodytes ptr-miR-676 mature miRNA
Sequence 71 - CUGUCCUAAGGUUGUUGAGU - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116