miRBase entry: ptr-mir-3149

Stem-loop ptr-mir-3149


Accession
MI0020603
Description
Pan troglodytes ptr-mir-3149 precursor miRNA
Gene family
MIPF0001935; mir-3149


Sequence

aaaggacaucaaaaugggauauacauacauguacacacacaugucauccacacacauacauauauauaugUUUGUAUGGAUAUGUGUGUGUAuguguguguauacacagaac
................(..((((((((((((((((((((((((((....(((.(((((........))))).)))...))))))))))))))))))))))))))..).....

Structure
aaaggacaucaaaaug ga                          aucc   c     cau 
                g  uauacauacauguacacacacauguc    aca acaua   a
                |  ||||||||||||||||||||||||||    ||| |||||    
                c  auauguguguguAUGUGUGUGUAUAG    UGU Uguau   u
-----------caaga ac                          -GUA   U     aua 


Annotation confidence Not enough data
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Genome context
chr8: 78240733-78240844 [-]

Database links

Mature ptr-miR-3149

Accession MIMAT0024056
Description Pan troglodytes ptr-miR-3149 mature miRNA
Sequence 71 - UUUGUAUGGAUAUGUGUGUGUA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116