miRBase entry: ptr-mir-3132

Stem-loop ptr-mir-3132


Accession
MI0020605
Description
Pan troglodytes ptr-mir-3132 precursor miRNA
Gene family
MIPF0001509; mir-3132


Sequence

ugaugaccacuguggugggaUGGGUAGAGAAGGAGCUCAGAggacggugcgccuuguuucccuugagcccuuccucucucaucccaccuguggcucuaggcuuccagauuc
......((((...(((((((((((.((((((((.((((((.(((.((....)).....))).)))))))))).))))))))))))))).)))).(((.((...)))))...

Structure
------------ugauga    ugu           U    -    A      A   ----c  u 
                  ccac   ggugggaUGGG AGAG AAGG GCUCAG gga     gg g
                  ||||   ||||||||||| |||| |||| |||||| |||     ||  
                  ggug   ccacccuacuc ucuc uucc cgaguu ccu     cc c
cuuagaccuucggaucuc    --u           -    c    -      c   uuguu  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2B: 110468799-110468909 [-]

Database links

Mature ptr-miR-3132

Accession MIMAT0024058
Description Pan troglodytes ptr-miR-3132 mature miRNA
Sequence 21 - UGGGUAGAGAAGGAGCUCAGA - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116