miRBase entry: ptr-mir-4524a

Stem-loop ptr-mir-4524a


Accession
MI0020606
Description
Pan troglodytes ptr-mir-4524a precursor miRNA
Gene family
MIPF0001330; mir-4524


Sequence

aaagagacagugauuacccuuccucuuuggaaggauagcagcaugaaccugucucacugcagaauuauuuUGAGACAGGCUUAUGCUGCUAuccuucaaaagaacacaucc
((((((..((........))..)))))).(((((((((((((((((.(((((((((..............))))))))).)))))))))))))))))..............

Structure
aaagagacagugauuacccuuccucuuug                 a         cugcag 
                             gaaggauagcagcauga ccugucuca      a
                             ||||||||||||||||| |||||||||       
                             cuuccuAUCGUCGUAUU GGACAGAGU      a
---------------ccuacacaagaaaa                 C         uuuauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 68519306-68519416 [-]

Database links

Mature ptr-miR-4524a

Accession MIMAT0024059
Description Pan troglodytes ptr-miR-4524a mature miRNA
Sequence 71 - UGAGACAGGCUUAUGCUGCUA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116