Stem-loop ptr-mir-4667

Accession

MI0020607

Description

Pan troglodytes ptr-mir-4667 precursor miRNA

Gene family

MIPF0001390; mir-4667

Sequence

cccuagagguggagguucugACUGGGGAGCAGAAGGAGAACCcaagaaaagcugacuuggaggucccuccuucuguccccacaggacuuuggccuggaugugccugcuuuc
.((...((((.(((((((((..((((((.(((((((((..((((((.........))))).)....)))))))))))))))))))))))).))))))..............

Structure

-------------c  uag    g         AC      G         --AA -     aaa 
              cc   aggu gagguucug  UGGGGA CAGAAGGAG    C Ccaag   a
              ||   |||| |||||||||  |||||| |||||||||    | |||||   g
              gg   uccg uuucaggac  accccu gucuuccuc    g gguuc   c
cuuucguccgugua  ---    g         --      -         ccug a     agu 

Annotation confidence Not enough data

Genome context

chr9: 36436786-36436896 [+]

Mature ptr-miR-4667

• Accession: MIMAT0024060
• Description: Pan troglodytes ptr-miR-4667 mature miRNA
• Sequence: 21 - ACUGGGGAGCAGAAGGAGAACC - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116