miRBase entry: ptr-mir-3136

Stem-loop ptr-mir-3136


Accession
MI0020611
Description
Pan troglodytes ptr-mir-3136 precursor miRNA
Gene family
MIPF0001575; mir-3136


Sequence

aaguaaaaauuaauaugaaaCUGACUGAAUAGGUAGGGUCAuuuuucugugacugcacauggcccuaccuauucaguuaguuccauauuaguuuauuucauauugauaagu
......(((((((((((.(((((((((((((((((((((((......((((....))))))))))))))))))))))))))).))))))))))).................

Structure
-----------aaguaa           a                       uuuuuc    a 
                 aaauuaauaug aaCUGACUGAAUAGGUAGGGUCA      ugug c
                 ||||||||||| |||||||||||||||||||||||      ||||  
                 uuugauuauac uugauugacuuauccaucccggu      acac u
ugaauaguuauacuuua           c                       ------    g 


Annotation confidence Not enough data
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Genome context
chr3: 70375552-70375662 [-]

Database links

Mature ptr-miR-3136

Accession MIMAT0024064
Description Pan troglodytes ptr-miR-3136 mature miRNA
Sequence 21 - CUGACUGAAUAGGUAGGGUCA - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116