miRBase entry: ptr-mir-3165

Stem-loop ptr-mir-3165


Accession
MI0020617
Description
Pan troglodytes ptr-mir-3165 precursor miRNA
Gene family
MIPF0001635; mir-3165


Sequence

auuuuugguacccgguggcaAGGUGGAUGCAAUGUGACCUCAacucuugguccucugaggucacauuguauccagcuuaccacuggguacuaacgugugggcagcagcugca
....((((((((((((((.(((.((((((((((((((((((((((...)))....))))))))))))))))))).))).)))))))))))))).......((((...)))).

Structure
---------------auuu              c   G                   ----   c 
                   uugguacccggugg aAG UGGAUGCAAUGUGACCUCA    acu  
                   |||||||||||||| ||| |||||||||||||||||||    ||| u
                   aaucaugggucacc uuc accuauguuacacuggagu    ugg  
acgucgacgacgggugugc              a   g                   cucc   u 


Annotation confidence Not enough data
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Genome context
chr11: 71991512-71991623 [-]

Database links

Mature ptr-miR-3165

Accession MIMAT0024070
Description Pan troglodytes ptr-miR-3165 mature miRNA
Sequence 21 - AGGUGGAUGCAAUGUGACCUCA - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116