miRBase entry: ptr-mir-2114

Stem-loop ptr-mir-2114


Accession
MI0020619
Description
Pan troglodytes ptr-mir-2114 precursor miRNA
Gene family
MIPF0001464; mir-2114


Sequence

uggggccaaagacaggccucugccuccaugcuccuagucccuuccuugaagcggucggauaaucacaugaCGAGCCUCAAGCAAGGGACUUCAagcugguggcuuccagc
.((((((.......)))))).(((.(((.(((...((((((((.(((((.((.((((..........))))..)).))))).))))))))...)))))).))).......

Structure
uggggccaaagacaggccucu   u   u   ccu        c     a  -g    gaua 
                     gcc cca gcu   agucccuu cuuga gc  gucg    a
                     ||| ||| |||   |||||||| ||||| ||  ||||     
                     cgg ggu cga   UCAGGGAA GAACU CG  Cagu    u
--------------cgaccuu   u   -   ACU        C     C  AG    acac 


Annotation confidence Not enough data
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Genome context
chrX: 149954188-149954297 [+]

Database links

Mature ptr-miR-2114

Accession MIMAT0024072
Description Pan troglodytes ptr-miR-2114 mature miRNA
Sequence 71 - CGAGCCUCAAGCAAGGGACUUCA - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116