miRBase entry: ggo-let-7a

Stem-loop ggo-let-7a

Accession

MI0020621

Description

Gorilla gorilla ggo-let-7a precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

agaccgacugcccuuuggggUGAGGUAGUAGGUUGUAUAGUuuggggcucugcccugcuaugggauaacuauacaaucuacugucuuuccugaaguggcuguaauaucu
(((...((.(((((((((((.(((((((((((((((((((((((((((...)))))).........))))))))))))))))))))))))))))).))).))....)))

Structure

   -ccg  u   -        U                     ---------      u 
aga    ac gcc cuuugggg GAGGUAGUAGGUUGUAUAGUu         uggggc  
|||    || ||| |||||||| |||||||||||||||||||||         |||||| c
ucu    ug cgg gaaguccu uucugucaucuaacauaucaa         gucccg  
   auaa  u   u        -                     uaggguauc      u

Annotation confidence Not enough data

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Genome context

chr22: 29760609-29760717 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-let-7a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-let-7a

Accession	MIMAT0024074
Description	Gorilla gorilla ggo-let-7a mature miRNA
Sequence	21 - UGAGGUAGUAGGUUGUAUAGU - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116