miRBase entry: ggo-let-7c

Stem-loop ggo-let-7c


Accession
MI0020622
Description
Gorilla gorilla ggo-let-7c precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

gaagcugugugcauccggguUGAGGUAGUAGGUUGUAUGGUuuagaguuacacccugggaguuaacuguacaaccuucuagcuuuccuuggagcacacuugagccauc
...(((((((((.((((((..(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))..))))))))))))...)))....

Structure
-gaa   ---      a      uU   G   U             ua  g ua  c 
    gcu   gugugc uccggg  GAG UAG AGGUUGUAUGGUu  ga u  ca  
    |||   |||||| ||||||  ||| ||| |||||||||||||  || |  || c
    cga   cacacg agguuc  uuc auc uccaacaugucaa  uu a  gu  
cuac   guu      -      cu   g   u             --  g gg  c 


Annotation confidence Not enough data
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Genome context
chr21: 7580444-7580551 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ggo-let-7c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-let-7c

Accession MIMAT0024075
Description Gorilla gorilla ggo-let-7c mature miRNA
Sequence 21 - UGAGGUAGUAGGUUGUAUGGU - 41
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116