Stem-loop ggo-let-7b

Accession

MI0020624

Description

Gorilla gorilla ggo-let-7b precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

caaggccgggccuggcggggUGAGGUAGUAGGUUGUGUGGUuucagggcagugauguugccccucagaagauaacuauacaaccuacugccuucccugaggagcccagu
....((.((((((..(((((.(((((((((((((((((((((((.((((((.....)))))).......)).)))))))))))))))))))))))))).)).)))).))

Structure

caag  c    -  gg     U                     -  ------a      u 
    gc gggc cu  cgggg GAGGUAGUAGGUUGUGUGGUu uc       gggcag g
    || |||| ||  ||||| ||||||||||||||||||||| ||       |||||| a
    ug cccg gg  guccc uuccgucauccaacauaucaa ag       cccguu u
----  a    a  -a     -                     u  aagacuc      g 

Annotation confidence Not enough data

Genome context

chr22: 29761546-29761654 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-let-7b

Mature ggo-let-7b

• Accession: MIMAT0024077
• Description: Gorilla gorilla ggo-let-7b mature miRNA
• Sequence: 21 - UGAGGUAGUAGGUUGUGUGGU - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116