Stem-loop ggo-mir-23b

Accession

MI0020642

Description

Gorilla gorilla ggo-mir-23b precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

gggcggcgcugcucucaggugcucuggcugcuuggguuccuggcaugcugauuugugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCAcgcaaccacgaccuug
(((((....)))))..((((....(((.(((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))).)))..))))..

Structure

gggcggcgcugcucuc    gcuc   c   u   --          -  c      gugacu 
                aggu    ugg ugc ugg  guuccuggca ug ugauuu      u
                ||||    ||| ||| |||  |||||||||| || ||||||       
                ucca    acc acg ACC  UAGGGACCGU AC ACUAaa      a
--------------gu    --gc   a   c   AU          U  -      auuaga 

Annotation confidence Not enough data

Genome context

chr9: 77106210-77106317 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-23b

Mature ggo-miR-23b

• Accession: MIMAT0024095
• Description: Gorilla gorilla ggo-miR-23b mature miRNA
• Sequence: 71 - AUCACAUUGCCAGGGAUUACCA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116