miRBase entry: ggo-mir-181d

Stem-loop ggo-mir-181d


Accession
MI0020647
Description
Gorilla gorilla ggo-mir-181d precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

ccacagccgaggucacaaucAACAUUCAUUGUUGUCGGUGGGUugugaggaccgaggccagacccaccgggggaugaaugucacuguggcugggccagacacggcuua
...((((((.(((........(((((((((....((((((((((.((.(........)))))))))))))..))))))))).))).))))))((((......))))..

Structure
-------------cca      a   cacaaucA         GUUG          g  a gac 
                cagccg ggu        ACAUUCAUU    UCGGUGGGUu ug g   c
                |||||| |||        |||||||||    |||||||||| || |    
                gucggu uca        uguaaguag    ggccacccag ac c   g
auucggcacagaccgg      g   -------c         --gg          -  - gga 


Annotation confidence Not enough data
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Genome context
chr19: 13652086-13652193 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ggo-mir-181d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-181d

Accession MIMAT0024100
Description Gorilla gorilla ggo-miR-181d mature miRNA
Sequence 21 - AACAUUCAUUGUUGUCGGUGGGU - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116