Stem-loop ggo-mir-487b

Accession

MI0020652

Description

Gorilla gorilla ggo-mir-487b precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uuucuuuuccgugcuaaccuuugguacuuggagagugguuaucccuguccuguucguuuugcucaugucgAAUCGUACAGGGUCAUCCACUuuuucaguaucaagagcgc
..........(((((....(((((((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).))))))))))))))

Structure

uuucuuuucc     aacc         u         uuau      c u     uuuug 
          gugcu    uuugguacu ggagagugg    cccugu c guucg     c
          |||||    ||||||||| |||||||||    |||||| | |||||      
          cgcga    gaacuauga uuuuUCACC    GGGACA G UAAgc     u
----------     ----         c         UACU      U C     uguac 

Annotation confidence Not enough data

Genome context

chr14: 85069466-85069575 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from ggo-mir-487b

Mature ggo-miR-487b

• Accession: MIMAT0024105
• Description: Gorilla gorilla ggo-miR-487b mature miRNA
• Sequence: 71 - AAUCGUACAGGGUCAUCCACU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116