miRBase entry: ggo-mir-139

Stem-loop ggo-mir-139


Accession
MI0020653
Description
Gorilla gorilla ggo-mir-139 precursor miRNA
Gene family
MIPF0000117; mir-139


Sequence

cgggacuggcucagguguauUCUACAGUGCACGUGUCUCCAGuguggcucggaggcuggagacgcggcccuguuggaguaacaacugaagccggagucugcgaagggugggc
.....(((((((((.((((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))).))).))).)))))).((((((.....))))))

Structure
-------------cggga      -   g   -      -   U  A            g gg 
                  cuggcu cag ugu auUCUA CAG GC CGUGUCUCCAGu u  c
                  |||||| ||| ||| |||||| ||| || |||||||||||| |  u
                  ggccga guc aca ugaggu guc cg gcgcagaggucg a  c
cgggugggaagcgucuga      a   a   a      u   c  -            g gg 


Annotation confidence Not enough data
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Genome context
chr11: 71680770-71680881 [-]

Database links

Mature ggo-miR-139

Accession MIMAT0024106
Description Gorilla gorilla ggo-miR-139 mature miRNA
Sequence 21 - UCUACAGUGCACGUGUCUCCAG - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116