miRBase entry: ggo-mir-433

Stem-loop ggo-mir-433


Accession
MI0020660
Description
Gorilla gorilla ggo-mir-433 precursor miRNA
Gene family
MIPF0000177; mir-433


Sequence

ccaaugcccggggagaaguacggugagccugucauuauucagagaggcuagauccucuguguugagaaggAUCAUGAUGGGCUCCUCGGUGuucuccagguagcggcac
((..((((...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).))))..))...

Structure
---  aa    cgg      gua   u           u   --------  g     cu 
   cc  ugcc   ggagaa   cgg gagccugucau auu        ca agagg  a
   ||  ||||   ||||||   ||| ||||||||||| |||        || |||||   
   gg  augg   ccucuu   GCU CUCGGGUAGUA UAg        gu ucucc  g
cac  cg    --a      GUG   C           C   gaagaguu  g     ua 


Annotation confidence Not enough data
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Genome context
chr14: 84899122-84899230 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ggo-mir-433
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-433

Accession MIMAT0024113
Description Gorilla gorilla ggo-miR-433 mature miRNA
Sequence 71 - AUCAUGAUGGGCUCCUCGGUG - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116