Stem-loop ggo-mir-34c

Accession

MI0020670

Description

Gorilla gorilla ggo-mir-34c precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

uuucuaugagucuaguuacuAGGCAGUGUAGUUAGCUGAUUGcuaauaguaccaaucacuaaccacacggccagguaaaaagauuugggaauucguccaaaugagcug
.((((..((((((..(((((.(((.((((.(((((.((((((.((....)).))))))))))).)))).))).)))))..)))))).))))(((((....)))))...

Structure

----------------u    au      ag     A   A    A     C      c  a 
                 uucu  gagucu  uuacu GGC GUGU GUUAG UGAUUG ua u
                 ||||  ||||||  ||||| ||| |||| ||||| |||||| ||  
                 aagg  uuuaga  aaugg ccg caca caauc acuaac au a
gucgaguaaaccugcuu    -g      aa     a   g    c     -      c  g 

Annotation confidence Not enough data

Genome context

chr11: 111455000-111455107 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-34c

Mature ggo-miR-34c

• Accession: MIMAT0024123
• Description: Gorilla gorilla ggo-miR-34c mature miRNA
• Sequence: 21 - AGGCAGUGUAGUUAGCUGAUUG - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116