Stem-loop ggo-mir-30e

Accession

MI0020671

Description

Gorilla gorilla ggo-mir-30e precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

uucugggcagucuuugcuacUGUAAACAUCCUUGACUGGAAGCuguaagguguucagaggagcuuucagucggauguuuacagcggcaggcugccacggucguccccagcuac
..(((((((((((..(((.((((((((((((..(((((((((((.(...(....)...).))))))))))))))))))))))).))))))))))).)))..............

Structure

------------uu   -        uu   a            UU           g aag u 
              cug ggcagucu  gcu cUGUAAACAUCC  GACUGGAAGCu u   g g
              ||| ||||||||  ||| ||||||||||||  ||||||||||| |   |  
              ggc ccgucgga  cgg gacauuuguagg  cugacuuucga g   c u
caucgaccccugcu   a        --   c            --           g aga u 

Annotation confidence Not enough data

Genome context

chr1: 41240529-41240641 [+]

Mature ggo-miR-30e

• Accession: MIMAT0024124
• Description: Gorilla gorilla ggo-miR-30e mature miRNA
• Sequence: 21 - UGUAAACAUCCUUGACUGGAAGC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116