Stem-loop ggo-mir-532

Accession

MI0020678

Description

Gorilla gorilla ggo-mir-532 precursor miRNA

Gene family

MIPF0000113; mir-188

Sequence

ccgacgugcuuucucuccucCAUGCCUUGAGUGUAGGACCGuuggcaucuuaauuacccucccacacccaaggcuugcagaagagcgagccuucucuucccucucuagugc
..((.(.((((.((((.((.((.((((((.((((.(((..((.............))..))).)))).)))))).)).)).)))).))))).)).................

Structure

---------------cc  c u    u    c  c  U      A    A   CC  uggca 
                 ga g gcuu cucu cu CA GCCUUG GUGU GGA  Gu     u
                 || | |||| |||| || || |||||| |||| |||  ||     c
                 cu c cgag gaga ga gu cggaac caca ccu  ca     u
cgugaucucucccuucu  u -    c    a  c  u      c    c   cc  uuaau 

Annotation confidence Not enough data

Genome context

chrX: 50437081-50437191 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-532

Mature ggo-miR-532

• Accession: MIMAT0024131
• Description: Gorilla gorilla ggo-miR-532 mature miRNA
• Sequence: 21 - CAUGCCUUGAGUGUAGGACCG - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116