miRBase entry: ggo-mir-323a

Stem-loop ggo-mir-323a


Accession
MI0020681
Description
Gorilla gorilla ggo-mir-323a precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

ggugucaguacggcugcugcuugguacuuggagagaggugguccguggcgcguucgcuuuauuuauggcgCACAUUACACGGUCGACCUCuuugcaguaucuaauccc
((((.((((...)))).)))).((((((.(.((((((((.(.(((((..(.((.((((........)))).)).)..))))).).)))))))).))))))).......

Structure
ggugucaguacggcugcugcuu      u g        g u     gc c  u    uua 
                      gguacu g agagaggu g ccgug  g gu cgcu   u
                      |||||| | |||||||| | |||||  | || ||||    
                      cuauga c uuuCUCCA C GGCAC  U CA gcgg   u
---------------cccuaau      - g        G U     AU A  C    uau 


Annotation confidence Not enough data
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Genome context
chr14: 85049044-85049151 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from ggo-mir-323a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-323a

Accession MIMAT0024134
Description Gorilla gorilla ggo-miR-323a mature miRNA
Sequence 71 - CACAUUACACGGUCGACCUC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116