miRBase entry: ggo-mir-376c

Stem-loop ggo-mir-376c


Accession
MI0020684
Description
Gorilla gorilla ggo-mir-376c precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

uccaggacucaauccuucuuugguauuuaaaagguggauauuccuucuauguuuauguuauuuaugguuaAACAUAGAGGAAAUUCCACGuuuucaguaucaaaugcugc
...((((.....))))..(((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))))......

Structure
uccaggacucaauccuuc         u    g     ua     u         uguua 
                  uuugguauu aaaa gugga  uuccu cuauguuua     u
                  ||||||||| |||| |||||  ||||| |||||||||     u
                  aaacuauga uuuu CACCU  AAGGA GAUACAAau     u
------------cgucgu         c    G     UA     -         uggua 


Annotation confidence Not enough data
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Genome context
chr14: 85062699-85062808 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from ggo-mir-376c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-376c

Accession MIMAT0024137
Description Gorilla gorilla ggo-miR-376c mature miRNA
Sequence 71 - AACAUAGAGGAAAUUCCACG - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116