miRBase entry: ggo-mir-874

Stem-loop ggo-mir-874


Accession
MI0020687
Description
Gorilla gorilla ggo-mir-874 precursor miRNA
Gene family
MIPF0000401; mir-874


Sequence

gcuccaucggaugaauuguugguguuagcccugcggccccacgcaccaggguaagagagacucucgcuucCUGCCCUGGCCCGAGGGACCGAcuggcugggccugccuucug
..(((...))).(((..((.(((..(((((...(((.(((.((..((((((((((.(((...))).))...))))))))..)).))).)))...))))).))).)).)))..

Structure
gcuccaucggau   uu  u   gu     cug   c   a  ca        ---  a   a 
            gaa  gu ggu  uagcc   cgg ccc cg  ccagggua   ag gag  
            |||  || |||  |||||   ||| ||| ||  ||||||||   || ||| c
            cuu  cg ccg  gucgg   GCC GGG GC  GGUCCCGU   uc cuc  
----------gu   -c  u   -g     ucA   A   A  CC        Ccu  g   u 


Annotation confidence Not enough data
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Genome context
chr5: 121117890-121118001 [-]

Database links

Mature ggo-miR-874

Accession MIMAT0024140
Description Gorilla gorilla ggo-miR-874 mature miRNA
Sequence 71 - CUGCCCUGGCCCGAGGGACCGA - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116