Stem-loop ggo-mir-494

Accession

MI0020707

Description

Gorilla gorilla ggo-mir-494 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uuuuuugaucagugcuaaucuucgauacucgaaggagagguuguccguguugucuucucuuuauuuaugaUGAAACAUACACGGGAAACCUCuuuuuuaguaucaaauc
.......................((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).)))))))))))))))))).....

Structure

uuuuuugaucagugcuaaucuuc      c            g       -   c   -  uuu 
                       gauacu gaaggagagguu uccgugu ugu uuc uc   a
                       |||||| |||||||||||| ||||||| ||| ||| ||   u
                       cuauga uuuuuuCUCCAA GGGCACA ACA AAG ag   u
------------------cuaaa      -            A       U   -   U  uau 

Annotation confidence Not enough data

Genome context

chr14: 85052955-85053063 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ggo-mir-494

Mature ggo-miR-494

• Accession: MIMAT0024160
• Description: Gorilla gorilla ggo-miR-494 mature miRNA
• Sequence: 71 - UGAAACAUACACGGGAAACCUC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116