Stem-loop ggo-mir-1185

Accession

MI0020720

Description

Gorilla gorilla ggo-mir-1185 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

ccacccuuugguacuuaaagAGAGGAUACCCUUUGUAUGUucacuugauuaauggcgaauauacagggggagacucuuauuugcguaucaaacucugucgaggaagacgc
......((((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))))...((((......)))).

Structure

------------ccaccc        u    -     GA A              a  uga 
                  uuugguac uaaa gAGAG  U CCCUUUGUAUGUuc cu   u
                  |||||||| |||| |||||  | |||||||||||||| ||    
                  aaacuaug guuu uucuc  a gggggacauauaag gg   u
cgcagaaggagcugucuc        c    a     ag -              c  uaa 

Annotation confidence Not enough data

Genome context

chr14: 85067224-85067333 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ggo-mir-1185

Mature ggo-miR-1185

• Accession: MIMAT0024173
• Description: Gorilla gorilla ggo-miR-1185 mature miRNA
• Sequence: 21 - AGAGGAUACCCUUUGUAUGU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116