miRBase entry: ggo-mir-551a

Stem-loop ggo-mir-551a


Accession
MI0020733
Description
Gorilla gorilla ggo-mir-551a precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

ggcugccagaggggacugccgggugacccuggaaauccagaguggguggggccugucugaccguuucuagGCGACCCACUCUUGGUUUCCAggguugcccuggaaaccaca
(((.(((.....)).).)))(((((((((((((((((.(((((((((...(((((............))))).))))))))).)))))))))))))))))(((...)))..

Structure
ggcugccagaggggacugcc                 c         ggg     ucuga 
                    gggugacccuggaaauc agagugggu   gccug     c
                    ||||||||||||||||| |||||||||   |||||      
                    cccguugggACCUUUGG UCUCACCCA   CGgau     c
---------acaccaaaggu                 U         --G     cuuug 


Annotation confidence Not enough data
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Genome context
chr1: 3270223-3270333 [-]

Database links

Mature ggo-miR-551a

Accession MIMAT0024186
Description Gorilla gorilla ggo-miR-551a mature miRNA
Sequence 71 - GCGACCCACUCUUGGUUUCCA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22453055
    Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
    "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
    "BMC Genomics (2012) 13:116