Stem-loop ggo-mir-502a

Accession

MI0020734

Description

Gorilla gorilla ggo-mir-502a precursor miRNA

Gene family

MIPF0000139; mir-500

Sequence

gugcccaagccuucugcccugcucccccucucuaauccuugcuaucugggugcuagugcugucucaaugcAAUGCACCUGGGCAAGGAUUCAgagagggggagcucaacugu
....................((((((((((((((((((((((...((((((((...(((.........)))..))))))))))))))))).)))))))))))))........

Structure

gugcccaagccuucugcccu             -         uau        uag   ugu 
                    gcucccccucucu aauccuugc   cugggugc   ugc   c
                    ||||||||||||| |||||||||   ||||||||   |||   u
                    cgagggggagagA UUAGGAACG   GGUCCACG   Acg   c
------------ugucaacu             C         ---        -UA   uaa 

Annotation confidence Not enough data

Genome context

chrX: 50448538-50448649 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from ggo-mir-502a

Mature ggo-miR-502a

• Accession: MIMAT0024187
• Description: Gorilla gorilla ggo-miR-502a mature miRNA
• Sequence: 71 - AAUGCACCUGGGCAAGGAUUCA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116